Dataset#

Dataset Classes

Dataset

Base class for all datasets.

NeighborsDataset

Counts the number of neighbors of each type for each cell in the tissue.

ExtrapolateNeighborsDataset

A NeighoborsDataset that includes cells near the edge of the tissue, correcting the bias due to partially observed neighborhoods.

RestrictedNeighborsDataset

Filters out cells according to lists of allowed cell types and cell types that must be neighboring each cell.

PolynomialDataset

Performs feature transformations and constructs polynomial features from a dataset.